Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.21■□□□□ 0.03
Rai1Q61818 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rai1Q61818 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rai1Q61818 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rai1Q61818 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rai1Q61818 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rai1Q61818 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rai1Q61818 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rai1Q61818 Haglr-201ENSMUST00000100000 2085 ntBASIC15.21■□□□□ 0.03
Rai1Q61818 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.21■□□□□ 0.03
Rai1Q61818 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rai1Q61818 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rai1Q61818 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rai1Q61818 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rai1Q61818 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rai1Q61818 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rai1Q61818 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rai1Q61818 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.2■□□□□ 0.02
Rai1Q61818 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.2■□□□□ 0.02
Rai1Q61818 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.2■□□□□ 0.02
Rai1Q61818 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.2■□□□□ 0.02
Rai1Q61818 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.2■□□□□ 0.02
Rai1Q61818 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rai1Q61818 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.2■□□□□ 0.02
Rai1Q61818 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.2■□□□□ 0.02
Rai1Q61818 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rai1Q61818 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.2■□□□□ 0.02
Rai1Q61818 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.2■□□□□ 0.02
Rai1Q61818 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.2■□□□□ 0.02
Rai1Q61818 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.2■□□□□ 0.02
Rai1Q61818 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rai1Q61818 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.19■□□□□ 0.02
Rai1Q61818 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Rpph1-201ENSMUST00000175096 319 ntBASIC15.19■□□□□ 0.02
Rai1Q61818 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rai1Q61818 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.19■□□□□ 0.02
Rai1Q61818 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rai1Q61818 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rai1Q61818 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rai1Q61818 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.19■□□□□ 0.02
Rai1Q61818 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rai1Q61818 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rai1Q61818 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.18■□□□□ 0.02
Rai1Q61818 Gm13365-201ENSMUST00000121188 973 ntBASIC15.18■□□□□ 0.02
Rai1Q61818 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rai1Q61818 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.18■□□□□ 0.02
Rai1Q61818 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rai1Q61818 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rai1Q61818 Gm9385-201ENSMUST00000117563 472 ntBASIC15.18■□□□□ 0.02
Rai1Q61818 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.18■□□□□ 0.02
Rai1Q61818 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.18■□□□□ 0.02
Rai1Q61818 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.18■□□□□ 0.02
Rai1Q61818 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Rai1Q61818 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Rai1Q61818 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rai1Q61818 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rai1Q61818 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rai1Q61818 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rai1Q61818 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rai1Q61818 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rai1Q61818 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rai1Q61818 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms