Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.54■□□□□ 0.4
Ecm1Q61508 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.54■□□□□ 0.4
Ecm1Q61508 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.54■□□□□ 0.4
Ecm1Q61508 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ecm1Q61508 Haglr-201ENSMUST00000100000 2085 ntBASIC17.54■□□□□ 0.4
Ecm1Q61508 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ecm1Q61508 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ecm1Q61508 Gm13216-201ENSMUST00000117145 591 ntBASIC17.53■□□□□ 0.4
Ecm1Q61508 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.53■□□□□ 0.4
Ecm1Q61508 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.53■□□□□ 0.4
Ecm1Q61508 Gm44872-201ENSMUST00000207864 420 ntBASIC17.53■□□□□ 0.4
Ecm1Q61508 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.53■□□□□ 0.4
Ecm1Q61508 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Ecm1Q61508 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ecm1Q61508 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ecm1Q61508 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ecm1Q61508 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ecm1Q61508 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ecm1Q61508 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ecm1Q61508 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ecm1Q61508 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ecm1Q61508 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ecm1Q61508 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.52■□□□□ 0.4
Ecm1Q61508 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.52■□□□□ 0.4
Ecm1Q61508 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.52■□□□□ 0.4
Ecm1Q61508 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ecm1Q61508 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ecm1Q61508 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ecm1Q61508 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ecm1Q61508 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ecm1Q61508 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ecm1Q61508 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ecm1Q61508 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ecm1Q61508 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ecm1Q61508 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.51■□□□□ 0.39
Ecm1Q61508 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ecm1Q61508 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ecm1Q61508 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ecm1Q61508 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ecm1Q61508 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ecm1Q61508 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ecm1Q61508 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ecm1Q61508 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ecm1Q61508 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ecm1Q61508 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.5■□□□□ 0.39
Ecm1Q61508 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.5■□□□□ 0.39
Ecm1Q61508 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ecm1Q61508 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ecm1Q61508 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Ecm1Q61508 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.5■□□□□ 0.39
Ecm1Q61508 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ecm1Q61508 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ecm1Q61508 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.49■□□□□ 0.39
Ecm1Q61508 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ecm1Q61508 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.49■□□□□ 0.39
Ecm1Q61508 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ecm1Q61508 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.49■□□□□ 0.39
Ecm1Q61508 Gm18246-201ENSMUST00000221023 728 ntBASIC17.49■□□□□ 0.39
Ecm1Q61508 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.49■□□□□ 0.39
Ecm1Q61508 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Ecm1Q61508 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.49■□□□□ 0.39
Ecm1Q61508 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ecm1Q61508 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ecm1Q61508 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ecm1Q61508 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms