Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.64□□□□□ -0.23
Clns1aQ61189 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.63□□□□□ -0.23
Clns1aQ61189 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clns1aQ61189 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.63□□□□□ -0.23
Clns1aQ61189 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.63□□□□□ -0.23
Clns1aQ61189 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clns1aQ61189 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Clns1aQ61189 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.63□□□□□ -0.23
Clns1aQ61189 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Clns1aQ61189 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.63□□□□□ -0.23
Clns1aQ61189 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Gm18666-201ENSMUST00000190039 958 ntBASIC13.63□□□□□ -0.23
Clns1aQ61189 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.63□□□□□ -0.23
Clns1aQ61189 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.63□□□□□ -0.23
Clns1aQ61189 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Clns1aQ61189 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.63□□□□□ -0.23
Clns1aQ61189 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clns1aQ61189 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clns1aQ61189 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Clns1aQ61189 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Clns1aQ61189 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clns1aQ61189 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.62□□□□□ -0.23
Clns1aQ61189 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.62□□□□□ -0.23
Clns1aQ61189 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Clns1aQ61189 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Gm10602-201ENSMUST00000098239 609 ntBASIC13.62□□□□□ -0.23
Clns1aQ61189 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clns1aQ61189 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clns1aQ61189 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clns1aQ61189 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clns1aQ61189 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clns1aQ61189 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clns1aQ61189 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Gm12085-201ENSMUST00000119263 940 ntBASIC13.61□□□□□ -0.23
Clns1aQ61189 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms