Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scnn1aQ61180 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.23■□□□□ 0.51
Scnn1aQ61180 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.23■□□□□ 0.51
Scnn1aQ61180 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scnn1aQ61180 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Scnn1aQ61180 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scnn1aQ61180 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scnn1aQ61180 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scnn1aQ61180 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scnn1aQ61180 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scnn1aQ61180 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scnn1aQ61180 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Gm4899-201ENSMUST00000178708 719 ntBASIC18.22■□□□□ 0.51
Scnn1aQ61180 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.22■□□□□ 0.51
Scnn1aQ61180 Gm2213-201ENSMUST00000197485 688 ntBASIC18.22■□□□□ 0.51
Scnn1aQ61180 Gm9682-201ENSMUST00000197505 556 ntBASIC18.22■□□□□ 0.51
Scnn1aQ61180 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scnn1aQ61180 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.22■□□□□ 0.51
Scnn1aQ61180 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.22■□□□□ 0.51
Scnn1aQ61180 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scnn1aQ61180 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.21■□□□□ 0.51
Scnn1aQ61180 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.21■□□□□ 0.51
Scnn1aQ61180 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.21■□□□□ 0.51
Scnn1aQ61180 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scnn1aQ61180 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.2■□□□□ 0.5
Scnn1aQ61180 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.2■□□□□ 0.5
Scnn1aQ61180 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.2■□□□□ 0.5
Scnn1aQ61180 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Gm7787-201ENSMUST00000216858 688 ntBASIC18.2■□□□□ 0.5
Scnn1aQ61180 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.2■□□□□ 0.5
Scnn1aQ61180 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.2■□□□□ 0.5
Scnn1aQ61180 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scnn1aQ61180 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.19■□□□□ 0.5
Scnn1aQ61180 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scnn1aQ61180 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Scnn1aQ61180 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Scnn1aQ61180 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms