Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Irf9Q61179 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Irf9Q61179 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
Irf9Q61179 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.73■□□□□ 0.75
Irf9Q61179 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.73■□□□□ 0.75
Irf9Q61179 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.73■□□□□ 0.75
Irf9Q61179 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Irf9Q61179 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.73■□□□□ 0.75
Irf9Q61179 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Irf9Q61179 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.72■□□□□ 0.75
Irf9Q61179 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.72■□□□□ 0.75
Irf9Q61179 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Gm8000-201ENSMUST00000188378 592 ntBASIC19.72■□□□□ 0.75
Irf9Q61179 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.72■□□□□ 0.75
Irf9Q61179 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Irf9Q61179 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Irf9Q61179 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf9Q61179 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Irf9Q61179 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf9Q61179 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf9Q61179 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.71■□□□□ 0.75
Irf9Q61179 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf9Q61179 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf9Q61179 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf9Q61179 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.71■□□□□ 0.75
Irf9Q61179 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Irf9Q61179 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.71■□□□□ 0.75
Irf9Q61179 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.71■□□□□ 0.75
Irf9Q61179 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf9Q61179 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf9Q61179 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf9Q61179 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf9Q61179 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf9Q61179 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Irf9Q61179 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.74
Irf9Q61179 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
Irf9Q61179 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Irf9Q61179 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf9Q61179 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf9Q61179 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf9Q61179 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf9Q61179 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Irf9Q61179 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf9Q61179 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf9Q61179 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Irf9Q61179 Gm37153-201ENSMUST00000193637 231 ntBASIC19.7■□□□□ 0.74
Irf9Q61179 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.7■□□□□ 0.74
Irf9Q61179 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf9Q61179 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.7■□□□□ 0.74
Irf9Q61179 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.7■□□□□ 0.74
Irf9Q61179 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Irf9Q61179 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Irf9Q61179 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf9Q61179 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Irf9Q61179 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf9Q61179 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf9Q61179 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Irf9Q61179 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Irf9Q61179 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Irf9Q61179 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Irf9Q61179 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Irf9Q61179 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.69■□□□□ 0.74
Irf9Q61179 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.69■□□□□ 0.74
Irf9Q61179 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf9Q61179 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.69■□□□□ 0.74
Irf9Q61179 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf9Q61179 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf9Q61179 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf9Q61179 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Irf9Q61179 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Irf9Q61179 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.69■□□□□ 0.74
Irf9Q61179 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.69■□□□□ 0.74
Irf9Q61179 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms