Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC22.77■■□□□ 1.24
Ptch1Q61115 Gm36858-201ENSMUST00000194501 2391 ntBASIC22.77■■□□□ 1.24
Ptch1Q61115 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ptch1Q61115 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC22.76■■□□□ 1.23
Ptch1Q61115 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch1Q61115 Gm7488-201ENSMUST00000117148 684 ntBASIC22.76■■□□□ 1.23
Ptch1Q61115 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch1Q61115 Gm7730-201ENSMUST00000212486 454 ntBASIC22.76■■□□□ 1.23
Ptch1Q61115 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch1Q61115 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch1Q61115 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC22.76■■□□□ 1.23
Ptch1Q61115 AC130669.1-201ENSMUST00000228537 1672 ntBASIC22.76■■□□□ 1.23
Ptch1Q61115 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Ptch1Q61115 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch1Q61115 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch1Q61115 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptch1Q61115 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptch1Q61115 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptch1Q61115 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptch1Q61115 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Ptch1Q61115 Gm2810-201ENSMUST00000118681 990 ntBASIC22.75■■□□□ 1.23
Ptch1Q61115 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Ptch1Q61115 Gm6888-201ENSMUST00000221983 706 ntBASIC22.75■■□□□ 1.23
Ptch1Q61115 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptch1Q61115 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptch1Q61115 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptch1Q61115 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ptch1Q61115 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Ptch1Q61115 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Ptch1Q61115 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC22.74■■□□□ 1.23
Ptch1Q61115 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC22.74■■□□□ 1.23
Ptch1Q61115 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC22.74■■□□□ 1.23
Ptch1Q61115 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Gm15487-201ENSMUST00000122373 465 ntBASIC22.74■■□□□ 1.23
Ptch1Q61115 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Ptch1Q61115 Gm7286-201ENSMUST00000182691 1007 ntBASIC22.74■■□□□ 1.23
Ptch1Q61115 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ptch1Q61115 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Ptch1Q61115 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Ptch1Q61115 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC22.73■■□□□ 1.23
Ptch1Q61115 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
Ptch1Q61115 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Ptch1Q61115 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Ptch1Q61115 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Ptch1Q61115 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Ptch1Q61115 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptch1Q61115 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Ptch1Q61115 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptch1Q61115 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Ptch1Q61115 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC22.72■■□□□ 1.23
Ptch1Q61115 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
Ptch1Q61115 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptch1Q61115 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptch1Q61115 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC22.72■■□□□ 1.23
Ptch1Q61115 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Ptch1Q61115 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC22.72■■□□□ 1.23
Ptch1Q61115 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptch1Q61115 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptch1Q61115 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptch1Q61115 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Ptch1Q61115 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ptch1Q61115 Gm14719-201ENSMUST00000121891 340 ntBASIC22.71■■□□□ 1.23
Ptch1Q61115 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC22.71■■□□□ 1.23
Ptch1Q61115 Gm8318-201ENSMUST00000182954 872 ntBASIC22.71■■□□□ 1.23
Ptch1Q61115 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC22.71■■□□□ 1.23
Ptch1Q61115 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptch1Q61115 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Ptch1Q61115 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptch1Q61115 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ptch1Q61115 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptch1Q61115 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC22.7■■□□□ 1.22
Ptch1Q61115 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC22.7■■□□□ 1.22
Ptch1Q61115 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptch1Q61115 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC22.7■■□□□ 1.22
Ptch1Q61115 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ptch1Q61115 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Ptch1Q61115 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms