Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.75■□□□□ 0.11
Sim1Q61045 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.75■□□□□ 0.11
Sim1Q61045 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sim1Q61045 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Sim1Q61045 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sim1Q61045 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.74■□□□□ 0.11
Sim1Q61045 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sim1Q61045 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Gm25990-201ENSMUST00000102440 86 ntBASIC15.74■□□□□ 0.11
Sim1Q61045 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.74■□□□□ 0.11
Sim1Q61045 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.74■□□□□ 0.11
Sim1Q61045 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Gm44430-201ENSMUST00000203376 995 ntBASIC15.74■□□□□ 0.11
Sim1Q61045 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.74■□□□□ 0.11
Sim1Q61045 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Sim1Q61045 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Sim1Q61045 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Sim1Q61045 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sim1Q61045 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Sim1Q61045 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Sim1Q61045 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.73■□□□□ 0.11
Sim1Q61045 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sim1Q61045 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Sim1Q61045 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.73■□□□□ 0.11
Sim1Q61045 Gm13418-201ENSMUST00000119097 944 ntBASIC15.73■□□□□ 0.11
Sim1Q61045 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.73■□□□□ 0.11
Sim1Q61045 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sim1Q61045 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.73■□□□□ 0.11
Sim1Q61045 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Sim1Q61045 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.73■□□□□ 0.11
Sim1Q61045 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Sim1Q61045 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sim1Q61045 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.72■□□□□ 0.11
Sim1Q61045 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.72■□□□□ 0.11
Sim1Q61045 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.72■□□□□ 0.11
Sim1Q61045 Auts2-212ENSMUST00000178555 309 ntBASIC15.72■□□□□ 0.11
Sim1Q61045 Gm4535-201ENSMUST00000182274 558 ntBASIC15.72■□□□□ 0.11
Sim1Q61045 Gm6089-201ENSMUST00000197666 938 ntBASIC15.72■□□□□ 0.11
Sim1Q61045 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.72■□□□□ 0.11
Sim1Q61045 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Gm10355-201ENSMUST00000097146 517 ntBASIC15.72■□□□□ 0.11
Sim1Q61045 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sim1Q61045 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms