Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col12a1Q60847 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.59■□□□□ 0.09
Col12a1Q60847 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col12a1Q60847 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col12a1Q60847 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col12a1Q60847 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col12a1Q60847 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col12a1Q60847 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.59■□□□□ 0.09
Col12a1Q60847 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Col12a1Q60847 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col12a1Q60847 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col12a1Q60847 Gm16215-201ENSMUST00000161990 637 ntBASIC15.59■□□□□ 0.09
Col12a1Q60847 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col12a1Q60847 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col12a1Q60847 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col12a1Q60847 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col12a1Q60847 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.58■□□□□ 0.08
Col12a1Q60847 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.58■□□□□ 0.08
Col12a1Q60847 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.58■□□□□ 0.08
Col12a1Q60847 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.58■□□□□ 0.08
Col12a1Q60847 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col12a1Q60847 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.58■□□□□ 0.08
Col12a1Q60847 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Col12a1Q60847 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col12a1Q60847 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col12a1Q60847 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col12a1Q60847 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.58■□□□□ 0.08
Col12a1Q60847 Gm2810-201ENSMUST00000118681 990 ntBASIC15.58■□□□□ 0.08
Col12a1Q60847 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col12a1Q60847 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col12a1Q60847 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col12a1Q60847 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.57■□□□□ 0.08
Col12a1Q60847 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
Col12a1Q60847 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col12a1Q60847 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Gm8602-201ENSMUST00000184045 607 ntBASIC15.56■□□□□ 0.08
Col12a1Q60847 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.56■□□□□ 0.08
Col12a1Q60847 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.56■□□□□ 0.08
Col12a1Q60847 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Col12a1Q60847 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.56■□□□□ 0.08
Col12a1Q60847 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.56■□□□□ 0.08
Col12a1Q60847 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Col12a1Q60847 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Gm18246-201ENSMUST00000221023 728 ntBASIC15.56■□□□□ 0.08
Col12a1Q60847 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.56■□□□□ 0.08
Col12a1Q60847 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col12a1Q60847 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col12a1Q60847 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col12a1Q60847 Gm6745-201ENSMUST00000199216 526 ntBASIC15.55■□□□□ 0.08
Col12a1Q60847 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col12a1Q60847 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col12a1Q60847 Rarb-207ENSMUST00000225921 2756 ntBASIC15.55■□□□□ 0.08
Col12a1Q60847 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col12a1Q60847 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.55■□□□□ 0.08
Col12a1Q60847 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Col12a1Q60847 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col12a1Q60847 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.55■□□□□ 0.08
Col12a1Q60847 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col12a1Q60847 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col12a1Q60847 Gm27680-201ENSMUST00000184192 160 ntBASIC15.54■□□□□ 0.08
Col12a1Q60847 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms