Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm13216-201ENSMUST00000117145 591 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm44357-201ENSMUST00000195897 142 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm19658-201ENSMUST00000196231 138 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm44367-201ENSMUST00000196836 138 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm44350-201ENSMUST00000197197 138 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm44390-201ENSMUST00000197533 144 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm44313-201ENSMUST00000198018 138 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm44486-201ENSMUST00000198508 138 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm44314-201ENSMUST00000199263 138 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm44394-201ENSMUST00000199558 138 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm44484-201ENSMUST00000199873 138 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm44466-201ENSMUST00000200264 138 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm44359-201ENSMUST00000200671 138 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm8655-201ENSMUST00000221159 852 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav2Q5R1I9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Gm8097-201ENSMUST00000117903 829 ntBASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Gm10060-201ENSMUST00000212002 111 ntBASIC12.66□□□□□ -0.38
Trav2Q5R1I9 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trav2Q5R1I9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms