Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7-2Q5R1I3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Gm29707-201ENSMUST00000196325 491 ntBASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Gm18032-201ENSMUST00000222541 538 ntBASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7-2Q5R1I3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Mir7071-201ENSMUST00000184847 69 ntBASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Gm44450-201ENSMUST00000199528 114 ntBASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-2Q5R1I3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms