Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.7□□□□□ -0.22
Trav5d-4Q5R1F6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5d-4Q5R1F6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Gm11950-201ENSMUST00000121615 838 ntBASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Trav5d-4Q5R1F6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 AA414768-201ENSMUST00000121924 1257 ntBASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav5d-4Q5R1F6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Gm29518-201ENSMUST00000190858 372 ntBASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Gm17808-201ENSMUST00000200859 894 ntBASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5d-4Q5R1F6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms