Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rprl3-201ENSMUST00000157400 290 ntBASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rnf20Q5DTM8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf20Q5DTM8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Olfr129-201ENSMUST00000122318 993 ntBASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Gm27704-201ENSMUST00000185094 107 ntBASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Gm33142-201ENSMUST00000193913 867 ntBASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf20Q5DTM8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf20Q5DTM8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf20Q5DTM8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.89■□□□□ 0.62
Rnf20Q5DTM8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
Rnf20Q5DTM8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf20Q5DTM8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Gm6257-201ENSMUST00000163864 910 ntBASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Mir3081-201ENSMUST00000175305 84 ntBASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf20Q5DTM8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms