Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Gm5566-201ENSMUST00000116118 459 ntBASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Herc2Q4U2R1 Gm18049-201ENSMUST00000208909 581 ntBASIC9.35□□□□□ -0.91
Herc2Q4U2R1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Gm28760-201ENSMUST00000185995 736 ntBASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Gm14660-201ENSMUST00000119809 575 ntBASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Gm9002-201ENSMUST00000178437 499 ntBASIC9.35□□□□□ -0.91
Herc2Q4U2R1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Gm24526-201ENSMUST00000082921 158 ntBASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Mir8109-201ENSMUST00000184375 117 ntBASIC9.35□□□□□ -0.91
Herc2Q4U2R1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.35□□□□□ -0.91
Herc2Q4U2R1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc2Q4U2R1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Gm4984-201ENSMUST00000115987 360 ntBASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Snora78-201ENSMUST00000158630 128 ntBASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms