Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Syne3Q4FZC9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Syne3Q4FZC9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Gm36967-201ENSMUST00000193814 266 ntBASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.89■□□□□ 0.29
Syne3Q4FZC9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne3Q4FZC9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne3Q4FZC9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne3Q4FZC9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms