Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf38aQ4FK66 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Gm11764-201ENSMUST00000120221 623 ntBASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Gm5682-201ENSMUST00000173402 505 ntBASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38aQ4FK66 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Gm15358-201ENSMUST00000119249 520 ntBASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38aQ4FK66 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Gm11779-201ENSMUST00000118541 368 ntBASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38aQ4FK66 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Gm14140-201ENSMUST00000119999 995 ntBASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Gm8000-201ENSMUST00000188378 592 ntBASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Haglr-201ENSMUST00000100000 2085 ntBASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38aQ4FK66 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf38aQ4FK66 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf38aQ4FK66 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms