Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp48Q3V0C5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Usp48Q3V0C5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp48Q3V0C5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp48Q3V0C5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp48Q3V0C5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.64■□□□□ 0.74
Usp48Q3V0C5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp48Q3V0C5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Gm11780-201ENSMUST00000136880 516 ntBASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp48Q3V0C5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp48Q3V0C5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.62■□□□□ 0.73
Usp48Q3V0C5 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Mir3113-201ENSMUST00000175478 76 ntBASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Chchd1-203ENSMUST00000224633 557 ntBASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Usp48Q3V0C5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp48Q3V0C5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms