Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nlrc4Q3UP24 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Gm6257-201ENSMUST00000163864 910 ntBASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nlrc4Q3UP24 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm8825-201ENSMUST00000182565 998 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm4518-201ENSMUST00000182638 718 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nlrc4Q3UP24 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Nlrc4Q3UP24 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Nlrc4Q3UP24 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Nlrc4Q3UP24 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms