Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Naf1Q3UMQ8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Gm18622-201ENSMUST00000219361 595 ntBASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Naf1Q3UMQ8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Naf1Q3UMQ8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Gm6550-201ENSMUST00000187574 993 ntBASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Naf1Q3UMQ8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Naf1Q3UMQ8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms