Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cops9Q3U898 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops9Q3U898 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops9Q3U898 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC10.93□□□□□ -0.66
Cops9Q3U898 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cops9Q3U898 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.93□□□□□ -0.66
Cops9Q3U898 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Gm17661-201ENSMUST00000170317 270 ntBASIC10.93□□□□□ -0.66
Cops9Q3U898 Appbp2os-202ENSMUST00000206972 447 ntBASIC10.93□□□□□ -0.66
Cops9Q3U898 Gm4974-201ENSMUST00000209974 875 ntBASIC10.93□□□□□ -0.66
Cops9Q3U898 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cops9Q3U898 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC10.93□□□□□ -0.66
Cops9Q3U898 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.93□□□□□ -0.66
Cops9Q3U898 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cops9Q3U898 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Cops9Q3U898 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cops9Q3U898 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Gm29340-201ENSMUST00000188763 3854 ntBASIC10.92□□□□□ -0.66
Cops9Q3U898 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Cops9Q3U898 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cops9Q3U898 Gm10654-201ENSMUST00000098653 1633 ntBASIC10.92□□□□□ -0.66
Cops9Q3U898 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cops9Q3U898 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC10.92□□□□□ -0.66
Cops9Q3U898 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Gm7514-201ENSMUST00000209475 934 ntBASIC10.92□□□□□ -0.66
Cops9Q3U898 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cops9Q3U898 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Cops9Q3U898 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cops9Q3U898 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Cops9Q3U898 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Cops9Q3U898 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cops9Q3U898 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.91□□□□□ -0.66
Cops9Q3U898 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.91□□□□□ -0.66
Cops9Q3U898 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
Cops9Q3U898 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Cops9Q3U898 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC10.91□□□□□ -0.66
Cops9Q3U898 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC10.91□□□□□ -0.66
Cops9Q3U898 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.91□□□□□ -0.66
Cops9Q3U898 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cops9Q3U898 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms