Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Gm13148-201ENSMUST00000118892 745 ntBASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccbe1Q3MI99 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Gm6420-201ENSMUST00000193885 723 ntBASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Gm5408-201ENSMUST00000197998 747 ntBASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Gm6365-201ENSMUST00000054711 744 ntBASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccbe1Q3MI99 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccbe1Q3MI99 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccbe1Q3MI99 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccbe1Q3MI99 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccbe1Q3MI99 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccbe1Q3MI99 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccbe1Q3MI99 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms