Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
Q3KNL4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Q3KNL4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Q3KNL4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.65■□□□□ 0.1
Q3KNL4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.65■□□□□ 0.1
Q3KNL4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.65■□□□□ 0.1
Q3KNL4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Q3KNL4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Q3KNL4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.65■□□□□ 0.1
Q3KNL4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.65■□□□□ 0.1
Q3KNL4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.64■□□□□ 0.09
Q3KNL4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.64■□□□□ 0.09
Q3KNL4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.64■□□□□ 0.09
Q3KNL4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.64■□□□□ 0.09
Q3KNL4 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.64■□□□□ 0.09
Q3KNL4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Q3KNL4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Q3KNL4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Q3KNL4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Q3KNL4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.63■□□□□ 0.09
Q3KNL4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Q3KNL4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Q3KNL4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Q3KNL4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Q3KNL4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.63■□□□□ 0.09
Q3KNL4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Q3KNL4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Q3KNL4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Q3KNL4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Q3KNL4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.62■□□□□ 0.09
Q3KNL4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.62■□□□□ 0.09
Q3KNL4 Gm22697-201ENSMUST00000175194 63 ntBASIC15.62■□□□□ 0.09
Q3KNL4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.62■□□□□ 0.09
Q3KNL4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Q3KNL4 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.62■□□□□ 0.09
Q3KNL4 Gm21559-201ENSMUST00000220638 855 ntBASIC15.62■□□□□ 0.09
Q3KNL4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Gm8587-201ENSMUST00000076538 843 ntBASIC15.62■□□□□ 0.09
Q3KNL4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.62■□□□□ 0.09
Q3KNL4 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.62■□□□□ 0.09
Q3KNL4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Q3KNL4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Q3KNL4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms