Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 Gm7669-201ENSMUST00000210184 1603 ntBASIC8.4□□□□□ -1.06
Ush2AQ2QI47 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC8.4□□□□□ -1.06
Ush2AQ2QI47 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ush2AQ2QI47 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Gm35558-201ENSMUST00000222675 2219 ntBASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Gm12390-201ENSMUST00000117897 397 ntBASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ush2AQ2QI47 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ush2AQ2QI47 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 CU024892.2-201ENSMUST00000224608 832 ntBASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Gm9728-201ENSMUST00000200197 1055 ntBASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 AC025913.2-201ENSMUST00000220136 1766 ntBASIC8.39□□□□□ -1.07
Ush2AQ2QI47 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ush2AQ2QI47 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gm29199-201ENSMUST00000187766 775 ntBASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gm5940-201ENSMUST00000117582 1068 ntBASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gm28760-201ENSMUST00000185995 736 ntBASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gm7399-201ENSMUST00000032395 858 ntBASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 BC021767-201ENSMUST00000126387 1716 ntBASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gm27701-201ENSMUST00000184498 110 ntBASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gm14263-201ENSMUST00000117955 746 ntBASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Gm8801-201ENSMUST00000173255 1064 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms