Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.22■□□□□ 0.03
Hoxc4Q08624 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.22■□□□□ 0.03
Hoxc4Q08624 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.22■□□□□ 0.03
Hoxc4Q08624 Gm45167-201ENSMUST00000208007 322 ntBASIC15.22■□□□□ 0.03
Hoxc4Q08624 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.22■□□□□ 0.03
Hoxc4Q08624 Gm7787-201ENSMUST00000216858 688 ntBASIC15.22■□□□□ 0.03
Hoxc4Q08624 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.22■□□□□ 0.03
Hoxc4Q08624 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc4Q08624 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hoxc4Q08624 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.21■□□□□ 0.03
Hoxc4Q08624 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Gm14722-201ENSMUST00000118943 689 ntBASIC15.21■□□□□ 0.03
Hoxc4Q08624 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Gm9682-201ENSMUST00000197505 556 ntBASIC15.21■□□□□ 0.03
Hoxc4Q08624 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.21■□□□□ 0.03
Hoxc4Q08624 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc4Q08624 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hoxc4Q08624 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.21■□□□□ 0.02
Hoxc4Q08624 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hoxc4Q08624 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.2■□□□□ 0.02
Hoxc4Q08624 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.2■□□□□ 0.02
Hoxc4Q08624 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Gm37935-201ENSMUST00000192012 982 ntBASIC15.2■□□□□ 0.02
Hoxc4Q08624 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.2■□□□□ 0.02
Hoxc4Q08624 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.2■□□□□ 0.02
Hoxc4Q08624 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc4Q08624 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms