Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Smarcc1P97496 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Smarcc1P97496 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Smarcc1P97496 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.82■□□□□ 0.76
Smarcc1P97496 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.82■□□□□ 0.76
Smarcc1P97496 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.82■□□□□ 0.76
Smarcc1P97496 Gm20949-201ENSMUST00000206478 952 ntBASIC19.82■□□□□ 0.76
Smarcc1P97496 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.82■□□□□ 0.76
Smarcc1P97496 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.82■□□□□ 0.76
Smarcc1P97496 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcc1P97496 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Smarcc1P97496 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Smarcc1P97496 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Smarcc1P97496 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.81■□□□□ 0.76
Smarcc1P97496 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.81■□□□□ 0.76
Smarcc1P97496 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smarcc1P97496 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.81■□□□□ 0.76
Smarcc1P97496 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Smarcc1P97496 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcc1P97496 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.8■□□□□ 0.76
Smarcc1P97496 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Smarcc1P97496 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Smarcc1P97496 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcc1P97496 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Smarcc1P97496 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcc1P97496 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcc1P97496 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.79■□□□□ 0.76
Smarcc1P97496 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Smarcc1P97496 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Smarcc1P97496 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.79■□□□□ 0.76
Smarcc1P97496 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smarcc1P97496 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.79■□□□□ 0.76
Smarcc1P97496 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.79■□□□□ 0.76
Smarcc1P97496 Gm11745-201ENSMUST00000121669 448 ntBASIC19.79■□□□□ 0.76
Smarcc1P97496 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.79■□□□□ 0.76
Smarcc1P97496 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.79■□□□□ 0.76
Smarcc1P97496 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.79■□□□□ 0.76
Smarcc1P97496 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.79■□□□□ 0.76
Smarcc1P97496 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcc1P97496 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcc1P97496 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcc1P97496 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcc1P97496 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcc1P97496 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smarcc1P97496 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.78■□□□□ 0.76
Smarcc1P97496 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smarcc1P97496 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.78■□□□□ 0.76
Smarcc1P97496 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.78■□□□□ 0.76
Smarcc1P97496 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smarcc1P97496 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.78■□□□□ 0.76
Smarcc1P97496 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms