Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm13365-201ENSMUST00000121188 973 ntBASIC19.92■□□□□ 0.78
Nkx2-3P97334 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.92■□□□□ 0.78
Nkx2-3P97334 Gm7787-201ENSMUST00000216858 688 ntBASIC19.92■□□□□ 0.78
Nkx2-3P97334 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.92■□□□□ 0.78
Nkx2-3P97334 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-3P97334 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.91■□□□□ 0.78
Nkx2-3P97334 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-3P97334 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.91■□□□□ 0.78
Nkx2-3P97334 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-3P97334 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Gm14701-201ENSMUST00000117156 348 ntBASIC19.9■□□□□ 0.78
Nkx2-3P97334 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.9■□□□□ 0.78
Nkx2-3P97334 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Gm8396-201ENSMUST00000057361 823 ntBASIC19.9■□□□□ 0.78
Nkx2-3P97334 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-3P97334 Gm15427-201ENSMUST00000117288 531 ntBASIC19.89■□□□□ 0.77
Nkx2-3P97334 Gm9385-201ENSMUST00000117563 472 ntBASIC19.89■□□□□ 0.77
Nkx2-3P97334 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.89■□□□□ 0.77
Nkx2-3P97334 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.89■□□□□ 0.77
Nkx2-3P97334 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.89■□□□□ 0.77
Nkx2-3P97334 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-3P97334 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Gm17271-201ENSMUST00000165535 355 ntBASIC19.89■□□□□ 0.77
Nkx2-3P97334 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Gm18246-201ENSMUST00000221023 728 ntBASIC19.89■□□□□ 0.77
Nkx2-3P97334 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-3P97334 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.88■□□□□ 0.77
Nkx2-3P97334 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-3P97334 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms