Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm10154-201ENSMUST00000084445 354 ntBASIC10.78□□□□□ -0.68
PrkdcP97313 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PrkdcP97313 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
PrkdcP97313 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PrkdcP97313 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PrkdcP97313 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.78□□□□□ -0.68
PrkdcP97313 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.78□□□□□ -0.68
PrkdcP97313 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.78□□□□□ -0.68
PrkdcP97313 Gm7775-201ENSMUST00000218871 853 ntBASIC10.78□□□□□ -0.68
PrkdcP97313 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PrkdcP97313 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
PrkdcP97313 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC10.78□□□□□ -0.68
PrkdcP97313 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
PrkdcP97313 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
PrkdcP97313 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
PrkdcP97313 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
PrkdcP97313 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
PrkdcP97313 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
PrkdcP97313 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
PrkdcP97313 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
PrkdcP97313 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
PrkdcP97313 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
PrkdcP97313 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
PrkdcP97313 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.77□□□□□ -0.69
PrkdcP97313 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC10.77□□□□□ -0.69
PrkdcP97313 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 AC154231.1-201ENSMUST00000220564 2175 ntBASIC10.77□□□□□ -0.69
PrkdcP97313 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
PrkdcP97313 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Gm8515-201ENSMUST00000194852 576 ntBASIC10.77□□□□□ -0.69
PrkdcP97313 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
PrkdcP97313 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
PrkdcP97313 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
PrkdcP97313 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
PrkdcP97313 Mir3102-201ENSMUST00000175555 104 ntBASIC10.76□□□□□ -0.69
PrkdcP97313 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 AC107711.5-202ENSMUST00000226429 702 ntBASIC10.76□□□□□ -0.69
PrkdcP97313 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
PrkdcP97313 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.76□□□□□ -0.69
PrkdcP97313 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
PrkdcP97313 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.76□□□□□ -0.69
PrkdcP97313 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.76□□□□□ -0.69
PrkdcP97313 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.76□□□□□ -0.69
PrkdcP97313 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.76□□□□□ -0.69
PrkdcP97313 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PrkdcP97313 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PrkdcP97313 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PrkdcP97313 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.75□□□□□ -0.69
PrkdcP97313 Gm38225-201ENSMUST00000194001 393 ntBASIC10.75□□□□□ -0.69
PrkdcP97313 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PrkdcP97313 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PrkdcP97313 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.75□□□□□ -0.69
PrkdcP97313 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PrkdcP97313 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PrkdcP97313 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PrkdcP97313 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms