Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim43cP86449 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43cP86449 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43cP86449 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43cP86449 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43cP86449 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43cP86449 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43cP86449 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim43cP86449 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim43cP86449 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43cP86449 App-207ENSMUST00000227737 2827 ntBASIC17.27■□□□□ 0.36
Trim43cP86449 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim43cP86449 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Trim43cP86449 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43cP86449 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim43cP86449 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trim43cP86449 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim43cP86449 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim43cP86449 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43cP86449 Gm18669-201ENSMUST00000216049 778 ntBASIC17.27■□□□□ 0.36
Trim43cP86449 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43cP86449 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trim43cP86449 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43cP86449 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.27■□□□□ 0.35
Trim43cP86449 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43cP86449 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim43cP86449 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim43cP86449 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim43cP86449 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim43cP86449 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.26■□□□□ 0.35
Trim43cP86449 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43cP86449 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim43cP86449 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim43cP86449 Gm25745-201ENSMUST00000174945 133 ntBASIC17.25■□□□□ 0.35
Trim43cP86449 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.25■□□□□ 0.35
Trim43cP86449 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim43cP86449 Gm7367-201ENSMUST00000057611 492 ntBASIC17.25■□□□□ 0.35
Trim43cP86449 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43cP86449 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim43cP86449 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim43cP86449 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Trim43cP86449 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.24■□□□□ 0.35
Trim43cP86449 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim43cP86449 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.24■□□□□ 0.35
Trim43cP86449 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Trim43cP86449 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Trim43cP86449 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim43cP86449 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim43cP86449 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim43cP86449 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43cP86449 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trim43cP86449 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms