Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.69□□□□□ -0.22
Ufd1P70362 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.69□□□□□ -0.22
Ufd1P70362 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.69□□□□□ -0.22
Ufd1P70362 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ufd1P70362 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ufd1P70362 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ufd1P70362 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ufd1P70362 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ufd1P70362 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Ufd1P70362 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.68□□□□□ -0.22
Ufd1P70362 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ufd1P70362 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.68□□□□□ -0.22
Ufd1P70362 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ufd1P70362 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ufd1P70362 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ufd1P70362 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.67□□□□□ -0.22
Ufd1P70362 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ufd1P70362 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.67□□□□□ -0.22
Ufd1P70362 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ufd1P70362 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Gm18958-201ENSMUST00000174258 762 ntBASIC13.67□□□□□ -0.22
Ufd1P70362 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ufd1P70362 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ufd1P70362 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ufd1P70362 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ufd1P70362 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufd1P70362 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufd1P70362 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufd1P70362 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufd1P70362 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ufd1P70362 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ufd1P70362 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufd1P70362 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufd1P70362 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Ufd1P70362 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Ufd1P70362 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ufd1P70362 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufd1P70362 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufd1P70362 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ufd1P70362 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.66□□□□□ -0.22
Ufd1P70362 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms