Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.3□□□□□ -0.28
Lsm5P62322 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.3□□□□□ -0.28
Lsm5P62322 Gm9731-201ENSMUST00000209480 747 ntBASIC13.3□□□□□ -0.28
Lsm5P62322 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.3□□□□□ -0.28
Lsm5P62322 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm5P62322 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Lsm5P62322 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.29□□□□□ -0.28
Lsm5P62322 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.29□□□□□ -0.28
Lsm5P62322 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.29□□□□□ -0.28
Lsm5P62322 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.29□□□□□ -0.28
Lsm5P62322 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.29□□□□□ -0.28
Lsm5P62322 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.29□□□□□ -0.28
Lsm5P62322 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.29□□□□□ -0.28
Lsm5P62322 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.29□□□□□ -0.28
Lsm5P62322 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.29□□□□□ -0.28
Lsm5P62322 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.29□□□□□ -0.28
Lsm5P62322 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm5P62322 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.29□□□□□ -0.28
Lsm5P62322 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Lsm5P62322 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Lsm5P62322 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.28□□□□□ -0.28
Lsm5P62322 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lsm5P62322 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.28□□□□□ -0.28
Lsm5P62322 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Lsm5P62322 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Lsm5P62322 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm5P62322 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm5P62322 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm5P62322 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm5P62322 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm5P62322 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm5P62322 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm5P62322 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm5P62322 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm5P62322 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.27□□□□□ -0.28
Lsm5P62322 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm5P62322 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm5P62322 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm5P62322 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms