Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Sec61a1P61620 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.04□□□□□ -0.16
Sec61a1P61620 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Gm10566-201ENSMUST00000086739 996 ntBASIC14.04□□□□□ -0.16
Sec61a1P61620 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Sec61a1P61620 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sec61a1P61620 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sec61a1P61620 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Sec61a1P61620 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a1P61620 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.03□□□□□ -0.16
Sec61a1P61620 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Gm6345-202ENSMUST00000180900 204 ntBASIC14.03□□□□□ -0.16
Sec61a1P61620 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Mir1668-201ENSMUST00000184114 107 ntBASIC14.03□□□□□ -0.16
Sec61a1P61620 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Gm21559-201ENSMUST00000220638 855 ntBASIC14.03□□□□□ -0.16
Sec61a1P61620 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Gm8587-201ENSMUST00000076538 843 ntBASIC14.03□□□□□ -0.16
Sec61a1P61620 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sec61a1P61620 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a1P61620 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Sec61a1P61620 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sec61a1P61620 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Sec61a1P61620 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Sec61a1P61620 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.02□□□□□ -0.16
Sec61a1P61620 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.02□□□□□ -0.16
Sec61a1P61620 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a1P61620 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.02□□□□□ -0.17
Sec61a1P61620 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.02□□□□□ -0.17
Sec61a1P61620 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.02□□□□□ -0.17
Sec61a1P61620 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a1P61620 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms