Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tpm1P58771 Phf7-203ENSMUST00000226565 1971 ntBASIC17.76■□□□□ 0.43
Tpm1P58771 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tpm1P58771 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tpm1P58771 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.75■□□□□ 0.43
Tpm1P58771 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Tpm1P58771 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.75■□□□□ 0.43
Tpm1P58771 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.75■□□□□ 0.43
Tpm1P58771 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Tpm1P58771 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.75■□□□□ 0.43
Tpm1P58771 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tpm1P58771 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Tpm1P58771 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tpm1P58771 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tpm1P58771 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.74■□□□□ 0.43
Tpm1P58771 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Odf3b-204ENSMUST00000227834 930 ntBASIC17.74■□□□□ 0.43
Tpm1P58771 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tpm1P58771 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.73■□□□□ 0.43
Tpm1P58771 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.73■□□□□ 0.43
Tpm1P58771 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.73■□□□□ 0.43
Tpm1P58771 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.73■□□□□ 0.43
Tpm1P58771 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Gm27463-201ENSMUST00000183569 57 ntBASIC17.73■□□□□ 0.43
Tpm1P58771 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.73■□□□□ 0.43
Tpm1P58771 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.73■□□□□ 0.43
Tpm1P58771 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tpm1P58771 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
Tpm1P58771 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.72■□□□□ 0.43
Tpm1P58771 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Tpm1P58771 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tpm1P58771 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tpm1P58771 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.72■□□□□ 0.43
Tpm1P58771 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.72■□□□□ 0.43
Tpm1P58771 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Tpm1P58771 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tpm1P58771 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.72■□□□□ 0.43
Tpm1P58771 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tpm1P58771 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms