Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn2bP55271 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Gm10052-201ENSMUST00000168019 960 ntBASIC15.24■□□□□ 0.03
Cdkn2bP55271 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Gm7889-201ENSMUST00000185591 958 ntBASIC15.24■□□□□ 0.03
Cdkn2bP55271 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Gm7729-201ENSMUST00000050143 801 ntBASIC15.24■□□□□ 0.03
Cdkn2bP55271 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdkn2bP55271 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn2bP55271 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.23■□□□□ 0.03
Cdkn2bP55271 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.23■□□□□ 0.03
Cdkn2bP55271 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdkn2bP55271 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.23■□□□□ 0.03
Cdkn2bP55271 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn2bP55271 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.23■□□□□ 0.03
Cdkn2bP55271 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Gm18959-201ENSMUST00000208954 655 ntBASIC15.22■□□□□ 0.03
Cdkn2bP55271 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkn2bP55271 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms