Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Abcd3P55096 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.22□□□□□ -0.13
Abcd3P55096 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Abcd3P55096 Gm13312-201ENSMUST00000119631 718 ntBASIC14.22□□□□□ -0.13
Abcd3P55096 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.22□□□□□ -0.13
Abcd3P55096 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Abcd3P55096 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Abcd3P55096 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.22□□□□□ -0.13
Abcd3P55096 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Abcd3P55096 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.22□□□□□ -0.13
Abcd3P55096 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Abcd3P55096 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Abcd3P55096 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd3P55096 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.21□□□□□ -0.13
Abcd3P55096 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.21□□□□□ -0.13
Abcd3P55096 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.21□□□□□ -0.13
Abcd3P55096 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Abcd3P55096 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.21□□□□□ -0.13
Abcd3P55096 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Abcd3P55096 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd3P55096 App-207ENSMUST00000227737 2827 ntBASIC14.21□□□□□ -0.14
Abcd3P55096 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Abcd3P55096 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Abcd3P55096 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Abcd3P55096 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Abcd3P55096 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Abcd3P55096 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Abcd3P55096 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Abcd3P55096 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Abcd3P55096 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Gm6257-201ENSMUST00000163864 910 ntBASIC14.2□□□□□ -0.14
Abcd3P55096 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.2□□□□□ -0.14
Abcd3P55096 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Abcd3P55096 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Abcd3P55096 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Abcd3P55096 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Abcd3P55096 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Abcd3P55096 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms