Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.68■□□□□ 0.26
NcanP55066 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NcanP55066 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NcanP55066 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.68■□□□□ 0.26
NcanP55066 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NcanP55066 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NcanP55066 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NcanP55066 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NcanP55066 Gm25287-201ENSMUST00000103846 110 ntBASIC16.68■□□□□ 0.26
NcanP55066 Gm22918-201ENSMUST00000103855 110 ntBASIC16.68■□□□□ 0.26
NcanP55066 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.68■□□□□ 0.26
NcanP55066 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NcanP55066 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.68■□□□□ 0.26
NcanP55066 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NcanP55066 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.68■□□□□ 0.26
NcanP55066 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NcanP55066 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NcanP55066 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NcanP55066 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
NcanP55066 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NcanP55066 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NcanP55066 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NcanP55066 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NcanP55066 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NcanP55066 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.67■□□□□ 0.26
NcanP55066 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.67■□□□□ 0.26
NcanP55066 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NcanP55066 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NcanP55066 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.67■□□□□ 0.26
NcanP55066 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NcanP55066 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.67■□□□□ 0.26
NcanP55066 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.67■□□□□ 0.26
NcanP55066 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.67■□□□□ 0.26
NcanP55066 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.67■□□□□ 0.26
NcanP55066 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NcanP55066 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NcanP55066 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.67■□□□□ 0.26
NcanP55066 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NcanP55066 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NcanP55066 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NcanP55066 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NcanP55066 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Gm12008-201ENSMUST00000117791 755 ntBASIC16.66■□□□□ 0.26
NcanP55066 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.66■□□□□ 0.26
NcanP55066 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.66■□□□□ 0.26
NcanP55066 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.66■□□□□ 0.26
NcanP55066 Mir3102-201ENSMUST00000175555 104 ntBASIC16.66■□□□□ 0.26
NcanP55066 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NcanP55066 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Mir8102-201ENSMUST00000184148 139 ntBASIC16.66■□□□□ 0.26
NcanP55066 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.66■□□□□ 0.26
NcanP55066 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NcanP55066 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.66■□□□□ 0.26
NcanP55066 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.66■□□□□ 0.26
NcanP55066 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.66■□□□□ 0.26
NcanP55066 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NcanP55066 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NcanP55066 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NcanP55066 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NcanP55066 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NcanP55066 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
NcanP55066 Gm7488-201ENSMUST00000117148 684 ntBASIC16.65■□□□□ 0.26
NcanP55066 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.65■□□□□ 0.26
NcanP55066 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NcanP55066 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NcanP55066 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.65■□□□□ 0.26
NcanP55066 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NcanP55066 Gm8969-201ENSMUST00000199694 526 ntBASIC16.65■□□□□ 0.26
NcanP55066 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.65■□□□□ 0.26
NcanP55066 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.65■□□□□ 0.26
NcanP55066 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NcanP55066 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NcanP55066 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NcanP55066 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.65■□□□□ 0.26
NcanP55066 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.65■□□□□ 0.26
NcanP55066 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.65■□□□□ 0.26
NcanP55066 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NcanP55066 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NcanP55066 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NcanP55066 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NcanP55066 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NcanP55066 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NcanP55066 Gm6415-201ENSMUST00000118488 348 ntBASIC16.64■□□□□ 0.25
NcanP55066 Gm15693-201ENSMUST00000120470 637 ntBASIC16.64■□□□□ 0.25
NcanP55066 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NcanP55066 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NcanP55066 Gm28631-201ENSMUST00000190740 334 ntBASIC16.64■□□□□ 0.25
NcanP55066 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NcanP55066 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NcanP55066 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms