Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Msh6P54276 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Msh6P54276 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Msh6P54276 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Msh6P54276 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.05■□□□□ 0.8
Msh6P54276 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Msh6P54276 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Gm13597-201ENSMUST00000121239 375 ntBASIC20.05■□□□□ 0.8
Msh6P54276 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.05■□□□□ 0.8
Msh6P54276 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Msh6P54276 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Msh6P54276 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.04■□□□□ 0.8
Msh6P54276 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Msh6P54276 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Msh6P54276 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC20.04■□□□□ 0.8
Msh6P54276 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Gm17271-201ENSMUST00000165535 355 ntBASIC20.04■□□□□ 0.8
Msh6P54276 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msh6P54276 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Msh6P54276 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Msh6P54276 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Msh6P54276 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 Gm8344-201ENSMUST00000119813 856 ntBASIC20.03■□□□□ 0.8
Msh6P54276 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.03■□□□□ 0.8
Msh6P54276 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC20.03■□□□□ 0.8
Msh6P54276 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.03■□□□□ 0.8
Msh6P54276 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.03■□□□□ 0.8
Msh6P54276 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Msh6P54276 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msh6P54276 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.02■□□□□ 0.8
Msh6P54276 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msh6P54276 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msh6P54276 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Msh6P54276 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Msh6P54276 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msh6P54276 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msh6P54276 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Msh6P54276 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.02■□□□□ 0.8
Msh6P54276 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Msh6P54276 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.02■□□□□ 0.8
Msh6P54276 Gm44492-201ENSMUST00000197012 141 ntBASIC20.02■□□□□ 0.8
Msh6P54276 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msh6P54276 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.02■□□□□ 0.8
Msh6P54276 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msh6P54276 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Msh6P54276 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.01■□□□□ 0.79
Msh6P54276 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh6P54276 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.01■□□□□ 0.79
Msh6P54276 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh6P54276 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Msh6P54276 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh6P54276 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Msh6P54276 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.01■□□□□ 0.79
Msh6P54276 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.01■□□□□ 0.79
Msh6P54276 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Msh6P54276 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh6P54276 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Msh6P54276 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh6P54276 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh6P54276 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh6P54276 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Msh6P54276 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms