Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Pdx1P52946 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.73■□□□□ 0.11
Pdx1P52946 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdx1P52946 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pdx1P52946 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pdx1P52946 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.72■□□□□ 0.11
Pdx1P52946 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.72■□□□□ 0.11
Pdx1P52946 Gm25745-201ENSMUST00000174945 133 ntBASIC15.72■□□□□ 0.11
Pdx1P52946 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.72■□□□□ 0.11
Pdx1P52946 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Pdx1P52946 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdx1P52946 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pdx1P52946 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pdx1P52946 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdx1P52946 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pdx1P52946 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pdx1P52946 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pdx1P52946 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.7■□□□□ 0.1
Pdx1P52946 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.7■□□□□ 0.1
Pdx1P52946 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.7■□□□□ 0.1
Pdx1P52946 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.7■□□□□ 0.1
Pdx1P52946 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.7■□□□□ 0.1
Pdx1P52946 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pdx1P52946 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdx1P52946 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.7■□□□□ 0.1
Pdx1P52946 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Pdx1P52946 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pdx1P52946 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pdx1P52946 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pdx1P52946 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.69■□□□□ 0.1
Pdx1P52946 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Pdx1P52946 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.69■□□□□ 0.1
Pdx1P52946 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Pdx1P52946 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.69■□□□□ 0.1
Pdx1P52946 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pdx1P52946 Dancr-204ENSMUST00000132389 2347 ntBASIC15.69■□□□□ 0.1
Pdx1P52946 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms