Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SftpbP50405 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
SftpbP50405 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
SftpbP50405 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.31■□□□□ 0.2
SftpbP50405 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.31■□□□□ 0.2
SftpbP50405 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.31■□□□□ 0.2
SftpbP50405 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.31■□□□□ 0.2
SftpbP50405 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SftpbP50405 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SftpbP50405 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.3■□□□□ 0.2
SftpbP50405 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.3■□□□□ 0.2
SftpbP50405 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.3■□□□□ 0.2
SftpbP50405 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SftpbP50405 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
SftpbP50405 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.29■□□□□ 0.2
SftpbP50405 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SftpbP50405 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SftpbP50405 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.29■□□□□ 0.2
SftpbP50405 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.29■□□□□ 0.2
SftpbP50405 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SftpbP50405 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SftpbP50405 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.29■□□□□ 0.2
SftpbP50405 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SftpbP50405 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SftpbP50405 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SftpbP50405 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.28■□□□□ 0.2
SftpbP50405 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.28■□□□□ 0.2
SftpbP50405 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.28■□□□□ 0.2
SftpbP50405 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SftpbP50405 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SftpbP50405 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SftpbP50405 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SftpbP50405 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SftpbP50405 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SftpbP50405 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SftpbP50405 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SftpbP50405 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SftpbP50405 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.27■□□□□ 0.2
SftpbP50405 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms