Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ercc3P49135 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.84■□□□□ 0.61
Ercc3P49135 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ercc3P49135 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Ercc3P49135 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.84■□□□□ 0.61
Ercc3P49135 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Gm15372-201ENSMUST00000120729 834 ntBASIC18.84■□□□□ 0.61
Ercc3P49135 Gm43347-201ENSMUST00000200226 580 ntBASIC18.84■□□□□ 0.61
Ercc3P49135 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.84■□□□□ 0.61
Ercc3P49135 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Birc2-201ENSMUST00000054878 378 ntBASIC18.84■□□□□ 0.61
Ercc3P49135 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.84■□□□□ 0.61
Ercc3P49135 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Ercc3P49135 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ercc3P49135 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ercc3P49135 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ercc3P49135 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ercc3P49135 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ercc3P49135 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ercc3P49135 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ercc3P49135 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ercc3P49135 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Gm27459-201ENSMUST00000184860 107 ntBASIC18.83■□□□□ 0.6
Ercc3P49135 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.83■□□□□ 0.6
Ercc3P49135 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Gm7461-201ENSMUST00000058918 827 ntBASIC18.83■□□□□ 0.6
Ercc3P49135 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ercc3P49135 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ercc3P49135 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Ercc3P49135 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Ercc3P49135 Gm7153-201ENSMUST00000117092 455 ntBASIC18.82■□□□□ 0.6
Ercc3P49135 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.82■□□□□ 0.6
Ercc3P49135 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.82■□□□□ 0.6
Ercc3P49135 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.82■□□□□ 0.6
Ercc3P49135 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ercc3P49135 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ercc3P49135 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.81■□□□□ 0.6
Ercc3P49135 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ercc3P49135 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Ercc3P49135 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Mir6404-201ENSMUST00000183699 94 ntBASIC18.81■□□□□ 0.6
Ercc3P49135 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.81■□□□□ 0.6
Ercc3P49135 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ercc3P49135 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ercc3P49135 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ercc3P49135 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms