Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GdnfP48540 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.94□□□□□ -0.18
GdnfP48540 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.94□□□□□ -0.18
GdnfP48540 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
GdnfP48540 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
GdnfP48540 Gm9987-201ENSMUST00000069768 567 ntBASIC13.94□□□□□ -0.18
GdnfP48540 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
GdnfP48540 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
GdnfP48540 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.94□□□□□ -0.18
GdnfP48540 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
GdnfP48540 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.94□□□□□ -0.18
GdnfP48540 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GdnfP48540 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
GdnfP48540 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
GdnfP48540 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
GdnfP48540 Gm16061-201ENSMUST00000122167 857 ntBASIC13.93□□□□□ -0.18
GdnfP48540 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.93□□□□□ -0.18
GdnfP48540 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.93□□□□□ -0.18
GdnfP48540 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.93□□□□□ -0.18
GdnfP48540 Gm10566-201ENSMUST00000086739 996 ntBASIC13.93□□□□□ -0.18
GdnfP48540 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GdnfP48540 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
GdnfP48540 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.92□□□□□ -0.18
GdnfP48540 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.92□□□□□ -0.18
GdnfP48540 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
GdnfP48540 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.92□□□□□ -0.18
GdnfP48540 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.92□□□□□ -0.18
GdnfP48540 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
GdnfP48540 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.92□□□□□ -0.18
GdnfP48540 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.92□□□□□ -0.18
GdnfP48540 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Mir5130-201ENSMUST00000175160 84 ntBASIC13.92□□□□□ -0.18
GdnfP48540 Mir7071-201ENSMUST00000184847 69 ntBASIC13.92□□□□□ -0.18
GdnfP48540 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.92□□□□□ -0.18
GdnfP48540 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
GdnfP48540 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.92□□□□□ -0.18
GdnfP48540 Gm18959-201ENSMUST00000208954 655 ntBASIC13.92□□□□□ -0.18
GdnfP48540 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.92□□□□□ -0.18
GdnfP48540 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
GdnfP48540 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
GdnfP48540 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
GdnfP48540 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GdnfP48540 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms