Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx3P48381 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx3P48381 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx3P48381 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx3P48381 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx3P48381 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx3P48381 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.39□□□□□ -0.11
Rfx3P48381 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.39□□□□□ -0.11
Rfx3P48381 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.39□□□□□ -0.11
Rfx3P48381 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rfx3P48381 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Rfx3P48381 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.39□□□□□ -0.11
Rfx3P48381 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rfx3P48381 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx3P48381 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfx3P48381 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rfx3P48381 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.38□□□□□ -0.11
Rfx3P48381 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.38□□□□□ -0.11
Rfx3P48381 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.38□□□□□ -0.11
Rfx3P48381 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.38□□□□□ -0.11
Rfx3P48381 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rfx3P48381 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rfx3P48381 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx3P48381 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Rfx3P48381 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Rfx3P48381 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Rfx3P48381 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.37□□□□□ -0.11
Rfx3P48381 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfx3P48381 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
Rfx3P48381 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rfx3P48381 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx3P48381 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfx3P48381 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.37□□□□□ -0.11
Rfx3P48381 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Rfx3P48381 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.36□□□□□ -0.11
Rfx3P48381 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx3P48381 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms