Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps4bP46467 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vps4bP46467 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vps4bP46467 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vps4bP46467 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Vps4bP46467 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vps4bP46467 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vps4bP46467 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vps4bP46467 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps4bP46467 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps4bP46467 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps4bP46467 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.13■□□□□ 0.17
Vps4bP46467 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Vps4bP46467 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps4bP46467 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.13■□□□□ 0.17
Vps4bP46467 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.13■□□□□ 0.17
Vps4bP46467 Gm18032-201ENSMUST00000222541 538 ntBASIC16.13■□□□□ 0.17
Vps4bP46467 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Vps4bP46467 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps4bP46467 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps4bP46467 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.12■□□□□ 0.17
Vps4bP46467 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
Vps4bP46467 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vps4bP46467 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.12■□□□□ 0.17
Vps4bP46467 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.12■□□□□ 0.17
Vps4bP46467 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.12■□□□□ 0.17
Vps4bP46467 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.12■□□□□ 0.17
Vps4bP46467 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.12■□□□□ 0.17
Vps4bP46467 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vps4bP46467 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps4bP46467 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps4bP46467 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Vps4bP46467 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps4bP46467 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps4bP46467 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps4bP46467 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps4bP46467 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps4bP46467 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps4bP46467 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.11■□□□□ 0.17
Vps4bP46467 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.11■□□□□ 0.17
Vps4bP46467 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps4bP46467 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Vps4bP46467 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms