Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox18P43680 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sox18P43680 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sox18P43680 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.19■□□□□ 0.02
Sox18P43680 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox18P43680 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Gm27646-201ENSMUST00000183989 110 ntBASIC15.19■□□□□ 0.02
Sox18P43680 Gm27300-201ENSMUST00000184085 97 ntBASIC15.19■□□□□ 0.02
Sox18P43680 Gm27335-201ENSMUST00000184758 97 ntBASIC15.19■□□□□ 0.02
Sox18P43680 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox18P43680 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox18P43680 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.19■□□□□ 0.02
Sox18P43680 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox18P43680 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sox18P43680 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sox18P43680 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Sox18P43680 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox18P43680 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox18P43680 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.18■□□□□ 0.02
Sox18P43680 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sox18P43680 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.18■□□□□ 0.02
Sox18P43680 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox18P43680 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox18P43680 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sox18P43680 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox18P43680 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox18P43680 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox18P43680 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox18P43680 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox18P43680 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sox18P43680 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Sox18P43680 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.17■□□□□ 0.02
Sox18P43680 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox18P43680 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox18P43680 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox18P43680 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox18P43680 Gm44492-201ENSMUST00000197012 141 ntBASIC15.17■□□□□ 0.02
Sox18P43680 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sox18P43680 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sox18P43680 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.17■□□□□ 0.02
Sox18P43680 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.17■□□□□ 0.02
Sox18P43680 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sox18P43680 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sox18P43680 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.17■□□□□ 0.02
Sox18P43680 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox18P43680 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox18P43680 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox18P43680 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox18P43680 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.17■□□□□ 0.02
Sox18P43680 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Sox18P43680 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.16■□□□□ 0.02
Sox18P43680 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.16■□□□□ 0.02
Sox18P43680 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.16■□□□□ 0.02
Sox18P43680 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.16■□□□□ 0.02
Sox18P43680 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms