Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h1aP43275 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.15□□□□□ -0.3
Hist1h1aP43275 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1aP43275 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.15□□□□□ -0.3
Hist1h1aP43275 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1aP43275 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h1aP43275 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h1aP43275 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h1aP43275 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h1aP43275 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h1aP43275 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h1aP43275 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.14□□□□□ -0.31
Hist1h1aP43275 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Hist1h1aP43275 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1aP43275 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Gm13474-201ENSMUST00000122466 815 ntBASIC13.13□□□□□ -0.31
Hist1h1aP43275 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.13□□□□□ -0.31
Hist1h1aP43275 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hist1h1aP43275 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Gm2274-201ENSMUST00000184539 609 ntBASIC13.13□□□□□ -0.31
Hist1h1aP43275 Gm30025-201ENSMUST00000218555 728 ntBASIC13.13□□□□□ -0.31
Hist1h1aP43275 Gm7370-201ENSMUST00000219471 767 ntBASIC13.13□□□□□ -0.31
Hist1h1aP43275 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1aP43275 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.13□□□□□ -0.31
Hist1h1aP43275 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.13□□□□□ -0.31
Hist1h1aP43275 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Gm16061-201ENSMUST00000122167 857 ntBASIC13.12□□□□□ -0.31
Hist1h1aP43275 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Gm27011-201ENSMUST00000182352 972 ntBASIC13.12□□□□□ -0.31
Hist1h1aP43275 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hist1h1aP43275 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms