Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Gm27867-201ENSMUST00000184778 125 ntBASIC14.57□□□□□ -0.08
Nkx2-2P42586 Gm21362-201ENSMUST00000194272 928 ntBASIC14.57□□□□□ -0.08
Nkx2-2P42586 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Gm25745-201ENSMUST00000174945 133 ntBASIC14.56□□□□□ -0.08
Nkx2-2P42586 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-2P42586 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-2P42586 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.56□□□□□ -0.08
Nkx2-2P42586 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-2P42586 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.55□□□□□ -0.08
Nkx2-2P42586 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-2P42586 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-2P42586 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-2P42586 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-2P42586 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-2P42586 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-2P42586 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.54□□□□□ -0.08
Nkx2-2P42586 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-2P42586 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm8825-201ENSMUST00000182565 998 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm4518-201ENSMUST00000182638 718 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.54□□□□□ -0.08
Nkx2-2P42586 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms