Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.21□□□□□ -0.29
Abca1P41233 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Abca1P41233 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Abca1P41233 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Abca1P41233 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Abca1P41233 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abca1P41233 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Abca1P41233 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abca1P41233 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abca1P41233 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abca1P41233 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.21□□□□□ -0.3
Abca1P41233 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Abca1P41233 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Abca1P41233 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Abca1P41233 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.2□□□□□ -0.3
Abca1P41233 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.2□□□□□ -0.3
Abca1P41233 Gm7063-201ENSMUST00000186840 981 ntBASIC13.2□□□□□ -0.3
Abca1P41233 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.2□□□□□ -0.3
Abca1P41233 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.2□□□□□ -0.3
Abca1P41233 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Abca1P41233 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.2□□□□□ -0.3
Abca1P41233 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Abca1P41233 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Abca1P41233 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Abca1P41233 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.2□□□□□ -0.3
Abca1P41233 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.2□□□□□ -0.3
Abca1P41233 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Abca1P41233 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abca1P41233 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.19□□□□□ -0.3
Abca1P41233 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Abca1P41233 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.19□□□□□ -0.3
Abca1P41233 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.19□□□□□ -0.3
Abca1P41233 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Grk6-207ENSMUST00000225925 2769 ntBASIC13.19□□□□□ -0.3
Abca1P41233 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.19□□□□□ -0.3
Abca1P41233 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
Abca1P41233 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Abca1P41233 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Abca1P41233 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Abca1P41233 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Abca1P41233 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Abca1P41233 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.18□□□□□ -0.3
Abca1P41233 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Abca1P41233 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Abca1P41233 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms