Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd9P40240 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cd9P40240 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd9P40240 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cd9P40240 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd9P40240 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.66■□□□□ 0.1
Cd9P40240 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Cd9P40240 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd9P40240 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.66■□□□□ 0.1
Cd9P40240 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Cd9P40240 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.66■□□□□ 0.1
Cd9P40240 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd9P40240 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd9P40240 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.65■□□□□ 0.1
Cd9P40240 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cd9P40240 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Gm12497-201ENSMUST00000138778 237 ntBASIC15.65■□□□□ 0.1
Cd9P40240 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cd9P40240 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd9P40240 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.65■□□□□ 0.1
Cd9P40240 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.65■□□□□ 0.1
Cd9P40240 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd9P40240 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cd9P40240 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cd9P40240 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd9P40240 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Cd9P40240 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.64■□□□□ 0.09
Cd9P40240 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.64■□□□□ 0.09
Cd9P40240 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Gm7367-201ENSMUST00000057611 492 ntBASIC15.64■□□□□ 0.09
Cd9P40240 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Cd9P40240 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cd9P40240 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.64■□□□□ 0.09
Cd9P40240 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd9P40240 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cd9P40240 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Cd9P40240 Gm14859-201ENSMUST00000117752 357 ntBASIC15.63■□□□□ 0.09
Cd9P40240 Gm14722-201ENSMUST00000118943 689 ntBASIC15.63■□□□□ 0.09
Cd9P40240 Gm25745-201ENSMUST00000174945 133 ntBASIC15.63■□□□□ 0.09
Cd9P40240 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.63■□□□□ 0.09
Cd9P40240 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.63■□□□□ 0.09
Cd9P40240 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd9P40240 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms