Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.98■□□□□ 0.31
Mmp3P28862 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Gm4995-201ENSMUST00000117247 432 ntBASIC16.98■□□□□ 0.31
Mmp3P28862 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.98■□□□□ 0.31
Mmp3P28862 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.98■□□□□ 0.31
Mmp3P28862 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.98■□□□□ 0.31
Mmp3P28862 Gm19164-201ENSMUST00000210667 640 ntBASIC16.98■□□□□ 0.31
Mmp3P28862 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.98■□□□□ 0.31
Mmp3P28862 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Mmp3P28862 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Mmp3P28862 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp3P28862 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.97■□□□□ 0.31
Mmp3P28862 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Mmp3P28862 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Mmp3P28862 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.97■□□□□ 0.31
Mmp3P28862 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.97■□□□□ 0.31
Mmp3P28862 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.97■□□□□ 0.31
Mmp3P28862 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
Mmp3P28862 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Mmp3P28862 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Mmp3P28862 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp3P28862 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp3P28862 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.96■□□□□ 0.31
Mmp3P28862 Grk6-207ENSMUST00000225925 2769 ntBASIC16.96■□□□□ 0.31
Mmp3P28862 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp3P28862 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Mmp3P28862 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Mmp3P28862 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp3P28862 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.96■□□□□ 0.31
Mmp3P28862 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.96■□□□□ 0.31
Mmp3P28862 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.96■□□□□ 0.31
Mmp3P28862 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Mmp3P28862 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp3P28862 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp3P28862 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp3P28862 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp3P28862 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp3P28862 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Mmp3P28862 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp3P28862 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp3P28862 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp3P28862 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp3P28862 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Mmp3P28862 Haglr-201ENSMUST00000100000 2085 ntBASIC16.95■□□□□ 0.3
Mmp3P28862 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.95■□□□□ 0.3
Mmp3P28862 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.95■□□□□ 0.3
Mmp3P28862 Gm4899-201ENSMUST00000178708 719 ntBASIC16.95■□□□□ 0.3
Mmp3P28862 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.95■□□□□ 0.3
Mmp3P28862 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.95■□□□□ 0.3
Mmp3P28862 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.95■□□□□ 0.3
Mmp3P28862 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.95■□□□□ 0.3
Mmp3P28862 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Mmp3P28862 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.95■□□□□ 0.3
Mmp3P28862 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms