Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CenpbP27790 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CenpbP27790 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CenpbP27790 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CenpbP27790 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CenpbP27790 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CenpbP27790 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CenpbP27790 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CenpbP27790 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CenpbP27790 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CenpbP27790 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC21.48■■□□□ 1.03
CenpbP27790 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC21.48■■□□□ 1.03
CenpbP27790 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CenpbP27790 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CenpbP27790 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CenpbP27790 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CenpbP27790 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CenpbP27790 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CenpbP27790 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CenpbP27790 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC21.48■■□□□ 1.03
CenpbP27790 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CenpbP27790 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CenpbP27790 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC21.48■■□□□ 1.03
CenpbP27790 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.47■■□□□ 1.03
CenpbP27790 Gm5408-201ENSMUST00000197998 747 ntBASIC21.47■■□□□ 1.03
CenpbP27790 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CenpbP27790 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Gm27528-202ENSMUST00000222916 2012 ntBASIC21.46■■□□□ 1.03
CenpbP27790 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.46■■□□□ 1.03
CenpbP27790 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CenpbP27790 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC21.46■■□□□ 1.03
CenpbP27790 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CenpbP27790 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CenpbP27790 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CenpbP27790 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
CenpbP27790 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CenpbP27790 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.45■■□□□ 1.02
CenpbP27790 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CenpbP27790 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
CenpbP27790 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC21.44■■□□□ 1.02
CenpbP27790 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
CenpbP27790 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CenpbP27790 AC121805.2-201ENSMUST00000218808 2538 ntBASIC21.44■■□□□ 1.02
CenpbP27790 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CenpbP27790 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CenpbP27790 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
CenpbP27790 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CenpbP27790 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CenpbP27790 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CenpbP27790 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms