Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40P27512 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Cd40P27512 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cd40P27512 Gm12644-201ENSMUST00000119935 606 ntBASIC14.38□□□□□ -0.11
Cd40P27512 Gm12497-201ENSMUST00000138778 237 ntBASIC14.38□□□□□ -0.11
Cd40P27512 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Cd40P27512 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.38□□□□□ -0.11
Cd40P27512 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40P27512 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40P27512 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Cd40P27512 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40P27512 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Cd40P27512 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40P27512 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Cd40P27512 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cd40P27512 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40P27512 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40P27512 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40P27512 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40P27512 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40P27512 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40P27512 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cd40P27512 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cd40P27512 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.37□□□□□ -0.11
Cd40P27512 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.37□□□□□ -0.11
Cd40P27512 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.37□□□□□ -0.11
Cd40P27512 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.37□□□□□ -0.11
Cd40P27512 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm8825-201ENSMUST00000182565 998 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm4518-201ENSMUST00000182638 718 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.37□□□□□ -0.11
Cd40P27512 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.37□□□□□ -0.11
Cd40P27512 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.37□□□□□ -0.11
Cd40P27512 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cd40P27512 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cd40P27512 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Cd40P27512 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cd40P27512 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cd40P27512 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cd40P27512 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cd40P27512 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.36□□□□□ -0.11
Cd40P27512 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.36□□□□□ -0.11
Cd40P27512 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.36□□□□□ -0.11
Cd40P27512 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cd40P27512 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cd40P27512 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Cd40P27512 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd40P27512 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cd40P27512 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.35□□□□□ -0.11
Cd40P27512 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.35□□□□□ -0.11
Cd40P27512 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Cd40P27512 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.35□□□□□ -0.11
Cd40P27512 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cd40P27512 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms