Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Nfkb1P25799 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Nfkb1P25799 Gm18622-201ENSMUST00000219361 595 ntBASIC16.3■□□□□ 0.2
Nfkb1P25799 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nfkb1P25799 Gm15590-201ENSMUST00000078419 552 ntBASIC16.3■□□□□ 0.2
Nfkb1P25799 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Nfkb1P25799 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nfkb1P25799 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nfkb1P25799 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nfkb1P25799 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nfkb1P25799 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Nfkb1P25799 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm8825-201ENSMUST00000182565 998 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm4518-201ENSMUST00000182638 718 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm5364-201ENSMUST00000216789 889 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.29■□□□□ 0.2
Nfkb1P25799 AV026068-213ENSMUST00000223675 1171 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.29■□□□□ 0.2
Nfkb1P25799 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nfkb1P25799 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nfkb1P25799 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nfkb1P25799 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Nfkb1P25799 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nfkb1P25799 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.28■□□□□ 0.2
Nfkb1P25799 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nfkb1P25799 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.28■□□□□ 0.2
Nfkb1P25799 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.28■□□□□ 0.2
Nfkb1P25799 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.28■□□□□ 0.2
Nfkb1P25799 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Nfkb1P25799 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nfkb1P25799 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Nfkb1P25799 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nfkb1P25799 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nfkb1P25799 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.27■□□□□ 0.2
Nfkb1P25799 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nfkb1P25799 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Nfkb1P25799 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Nfkb1P25799 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.27■□□□□ 0.2
Nfkb1P25799 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nfkb1P25799 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms